Chemical Sciences

Molecular Fluorescence Spectroscopy Lab

This lab is about molecular fluorescence spectroscopy. In molecular fluorescence spectroscopy, a molecule is first irradiated with ultraviolet (UV) or visible radiation and then the emission of light of longer wavelengths is detected. Many common materials like certain minerals, human teeth, riboflavin (vitamin B2), etc. fluoresce, emitting visible light after absorbing ultraviolet light. Fluorescence spectroscopy is a technique of considerable practical importance. Measurements of fluorescence can provide important information regarding the molecule, its quantity and local environment, etc. Fluorescence spectroscopy finds widespread use in basic and applied researches of chemical and biological sciences fields of sensing, environmental monitoring, DNA sequencing, cell identification and sorting in flow cytometry, and so on. Analytical techniques based on fluorescence can yield low detection limits and are very sensitive (approach that of electrochemical methods), highly specific, often economical and relatively simple to perform. The high specificity arises from the fact that fluorophores exhibit specific excitation (absorption) and emission (fluorescence) wavelengths. In crime investigation, fingerprints can be revealed by their yellow fluorescence, when argon-ion lasers are used to flood an area with intense blue light.

Excitation of all molecules does not produce fluorescence. Several factors affect the fluorescence. For example, molecules that are aromatic, polycyclic aromatic or contain multiple-conjugated double bonds with a high degree of resonance stability generally fluoresce. Substituents such as –NH2, –OH, –F, –OCH3, –NHCH3, and –N(CH3)2 groups often enhance fluorescence whereas –Cl, –Br, –I, –NHCOCH3, –NO2, and –COOH groups decrease or quench fluorescence. Molecular rigidity or presence of fluorophore in glassy state or viscous solution enhances the fluorescence. Atoms are generally not fluorescent in condensed phases, except lanthanide elements. For example, europium and terbium ions are fluorescent. Fluorescence in these ions results from electronic transitions between f orbitals which are shielded from the solvent by higher field orbitals. These properties provide very useful information about the substance and may be exploited for many applications.

When fluorescence and UV-visible absorption methods are compared, fluorescence is usually more sensitive and very low limit of detection is achievable in this case. Because fewer fluorescing species exist than absorbing species in the ultraviolet-visible region, interference is less in fluorescence techniques. Further, in the fluorescence spectroscopy, the emission signal is compared electronically with a reference emission of zero, whereas in the the absorption spectroscopy, the comparison is made between the intensities of two quite high energy beams where a weakly absorbing signal may be lost in the instrument noise. In fluorescence techniques, a pair of wavelengths, excitation and emission, characterize the process instead of only one in the UV-Visible. Therefore, fluorescence is more selective also. However, UV-visible absorption spectroscopy is nearly universal and often more accurate.

Molecular energy levels; electronic transitions; molecular spectroscopy; Born-Oppenheimer approximation; fluorescence; Quantum yield; fluorescence quenching; Stern-Volmer plot; Beer-Lambert law.